Transcript: ENST00000562148.1 PRRT2-008

Description

proline-rich transmembrane protein 2 [Source:HGNC Symbol;Acc:30500]

Gene Synonyms

BFIC2, BFIS2, DKFZp547J199, DSPB3, DYT10, EKD1, FLJ25513, ICCA, IFITMD1, PKC

Location

Chromosome 16: 29,823,177-29,824,651 forward strand.

About this transcript

This transcript has 2 exons, is associated with 889 variant alleles and maps to 108 oligo probes.

Gene

This transcript is a product of gene ENSG00000167371.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000300797.6	PRRT2-002	3000	299aa	ENSP00000300797.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58446	H3BN10 Q7Z6L0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358758.7	PRRT2-001	2548	340aa	ENSP00000351608.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10654	H3BN10 Q7Z6L0	NM_145239.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000567659.1	PRRT2-003	1470	394aa	ENSP00000456226.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58445	H3BN10 Q7Z6L0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000572820.1	PRRT2-009	576	135aa	ENSP00000458291.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L0R5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000562148.1	PRRT2-008	522	92aa	ENSP00000454634.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BN10	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000567551.1	PRRT2-005	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 522 bps, Translation length: 92 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000562148.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000435559 (version 19)

Favourite species

All species

Recent locations

Transcript: ENST00000562148.1 PRRT2-008

Summary