Transcript: ENST00000569816.1 SLC38A8-003

Description

solute carrier family 38, member 8 [Source:HGNC Symbol;Acc:32434]

Location

About this transcript

This transcript has 3 exons, is annotated with 2 domains and features, is associated with 6683 variant alleles and maps to 57 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000299709.3	SLC38A8-001	1308	435aa	ENSP00000299709.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32495	A6NNN8 H3BP02 H3BUP5	NM_001080442.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000568178.1	SLC38A8-002	861	262aa	ENSP00000457737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP02 H3BUP5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000569816.1	SLC38A8-003	578	46aa	ENSP00000455085.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP02	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000568003.1	SLC38A8-004	501	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 578 bps, Translation length: 46 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000569816.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000432625 (version 1)