Transcript: ENST00000562146.1 BEAN1-009

Description

brain expressed, associated with NEDD4, 1 [Source:HGNC Symbol;Acc:24160]

Gene Synonyms

BEAN, SCA31

Location

Chromosome 16: 66,511,538-66,527,432 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 1 domain and feature, is associated with 7326 variant alleles and maps to 79 oligo probes.

Gene

This transcript is a product of gene ENSG00000166546.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000536005.2	BEAN1-002	1988	259aa	ENSP00000442793.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54015	Q3B7T3	NM_001178020.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564819.1	BEAN1-007	2929	72aa	ENSP00000456430.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BRW1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000299694.8	BEAN1-003	2160	150aa	ENSP00000299694.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58469	Q3B7T3	NM_001136106.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561796.1	BEAN1-004	1078	208aa	ENSP00000455212.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58470	Q3B7T3	NM_001197225.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562146.1	BEAN1-009	644	82aa	ENSP00000462088.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000562849.2	BEAN1-001	2469	150aa	ENSP00000456822.1	Nonsense mediated decay	CCDS58469	Q3B7T3	-	-
ENST00000563075.1	BEAN1-008	720	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000566654.1	BEAN1-006	449	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000569272.1	BEAN1-010	963	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 644 bps, Translation length: 82 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000562146.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000422916 (version 2)

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Transcript: ENST00000562146.1 BEAN1-009

Summary