Transcript: ENST00000299698.7 A2ML1-001

Description

alpha-2-macroglobulin-like 1 [Source:HGNC Symbol;Acc:23336]

Gene Synonyms

CPAMD9, FLJ25179

Location

Chromosome 12: 8,975,068-9,029,381 forward strand.

About this transcript

This transcript has 36 exons, is annotated with 18 domains and features, is associated with 25584 variant alleles and maps to 936 oligo probes.

Gene

This transcript is a product of gene ENSG00000166535.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000299698.7	A2ML1-001	5274	1454aa	ENSP00000299698.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8596	A8K2U0 H0YGG5	NM_144670.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539547.1	A2ML1-004	3460	963aa	ENSP00000438292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H2Z2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541459.1	A2ML1-003	3370	1004aa	ENSP00000443174.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YGG5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000545692.1	A2ML1-009	570	183aa	ENSP00000440057.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXP1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000536789.1	A2ML1-008	462	81aa	ENSP00000440662.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYG7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000537475.1	A2ML1-006	1136	182aa	ENSP00000445674.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000540049.1	A2ML1-010	592	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000537546.1	A2ML1-011	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000545850.1	A2ML1-007	464	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 36, Coding exons: 35, Transcript length: 5,274 bps, Translation length: 1,454 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A8K2U0

CCDS

This transcript is a member of the Human CCDS set: CCDS8596

Version

ENST00000299698.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000250304 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000299698.7 A2ML1-001

Summary