Transcript: ENST00000562132.1 GPT2-004

Description

glutamic pyruvate transaminase (alanine aminotransferase) 2 [Source:HGNC Symbol;Acc:18062]

Gene Synonyms

AAT2, ALT2

Location

Chromosome 16: 46,918,607-46,943,786 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 11042 variant alleles and maps to 98 oligo probes.

Gene

This transcript is a product of gene ENSG00000166123.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340124.4	GPT2-001	3984	523aa	ENSP00000345282.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10725	B3KR40 Q8TD30	NM_133443.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440783.2	GPT2-002	4228	423aa	ENSP00000413804.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45478	B3KR40 Q8TD30	NM_001142466.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562132.1	GPT2-004	554	177aa	ENSP00000457475.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BU54	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000569193.1	GPT2-003	3205	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000562801.1	GPT2-006	2092	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 554 bps, Translation length: 177 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000562132.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000430622 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000562132.1 GPT2-004

Summary