Transcript: ENST00000444825.2 PNLIPRP2-002

Description

pancreatic lipase-related protein 2 [Source:HGNC Symbol;Acc:9157]

Gene Synonyms

PLRP2

Location

About this transcript

This transcript has 4 exons, is associated with 2692 variant alleles and maps to 147 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000537242.1	PNLIPRP2-201	1479	468aa	ENSP00000446346.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F5H1V6	NM_005396.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433618.4	PNLIPRP2-005	1409	469aa	ENSP00000424858.3	Pseudogene owing to a SNP/indel but in other individuals/haplotypes/strains the gene is translated.Polymorphic pseudogene	-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000298771.7	PNLIPRP2-004	1481	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000429325.1	PNLIPRP2-001	578	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000444825.2	PNLIPRP2-002	578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 578 bps,

Version

ENST00000444825.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000050544 (version 2)