Transcript: ENST00000484237.1 COG5-006

Description

component of oligomeric golgi complex 5 [Source:HGNC Symbol;Acc:14857]

Gene Synonyms

CDG2I, GOLTC1, GTC90

Location

Chromosome 7: 107,002,513-107,121,387 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 52890 variant alleles and maps to 113 oligo probes.

Gene

This transcript is a product of gene ENSG00000164597.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000297135.3	COG5-003	4060	860aa	ENSP00000297135.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5742	B3KMW0 Q9UP83 U3KQU7	NM_006348.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393603.2	COG5-002	5418	823aa	ENSP00000377228.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55152	Q9UP83 U3KQU7	NM_001161520.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000347053.3	COG5-001	4532	839aa	ENSP00000334703.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5743	Q9UP83 U3KQU7	NM_181733.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000605888.1	COG5-010	576	179aa	ENSP00000476238.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQU7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000475638.2	COG5-004	592	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468350.1	COG5-008	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484237.1	COG5-006	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464542.1	COG5-009	897	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462342.1	COG5-007	577	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469503.1	COG5-005	238	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 574 bps,

Version

ENST00000484237.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000349397 (version 1)

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Transcript: ENST00000484237.1 COG5-006

Summary