Transcript: ENST00000467520.1 TMEM41A-008

Description

transmembrane protein 41A [Source:HGNC Symbol;Acc:30544]

Gene Synonyms

2900010K02Rik, MGC15397

Location

Chromosome 3: 185,213,016-185,216,510 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1590 variant alleles and maps to 146 oligo probes.

Gene

This transcript is a product of gene ENSG00000163900.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000421852.1	TMEM41A-001	2827	264aa	ENSP00000406885.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3271	Q96HV5	NM_080652.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000296254.3	TMEM41A-005	1060	92aa	ENSP00000296254.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BXL1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382227.3	TMEM41A-006	541	99aa	ENSP00000371662.3	Nonsense mediated decay		F8WDE2	-	-
ENST00000475480.1	TMEM41A-007	1035	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484062.1	TMEM41A-009	743	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467520.1	TMEM41A-008	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467061.1	TMEM41A-004	4921	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 563 bps,

Version

ENST00000467520.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000345181 (version 1)

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Transcript: ENST00000467520.1 TMEM41A-008

Summary