Transcript: ENST00000421852.1 TMEM41A-001

Description

transmembrane protein 41A [Source:HGNC Symbol;Acc:30544]

Gene Synonyms

2900010K02Rik, MGC15397

Location

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features, is associated with 4158 variant alleles and maps to 436 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000421852.1	TMEM41A-001	2827	264aa	ENSP00000406885.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3271	Q96HV5	NM_080652.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000296254.3	TMEM41A-005	1060	92aa	ENSP00000296254.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BXL1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382227.3	TMEM41A-006	541	99aa	ENSP00000371662.3	Nonsense mediated decay		F8WDE2	-	-
ENST00000475480.1	TMEM41A-007	1035	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484062.1	TMEM41A-009	743	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467520.1	TMEM41A-008	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467061.1	TMEM41A-004	4921	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,827 bps, Translation length: 264 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96HV5

CCDS

This transcript is a member of the Human CCDS set: CCDS3271

Version

ENST00000421852.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000345174 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.