Transcript: ENST00000369494.1 ATP1A1-002

Description

ATPase, Na+/K+ transporting, alpha 1 polypeptide [Source:HGNC Symbol;Acc:799]

Location

Chromosome 1: 116,925,033-116,931,285 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 12 domains and features, is associated with 2684 variant alleles and maps to 167 oligo probes.

Gene

This transcript is a product of gene ENSG00000163399.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000537345.1	ATP1A1-202	3763	1023aa	ENSP00000445306.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53351	P05023 Q5TC01 Q5TC02	NM_001160233.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000295598.5	ATP1A1-001	3654	1023aa	ENSP00000295598.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS887	P05023 Q5TC01 Q5TC02	NM_000701.7	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369496.4	ATP1A1-201	3572	992aa	ENSP00000358508.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53352	P05023 Q5TC01 Q5TC02	NM_001160234.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369494.1	ATP1A1-002	698	144aa	ENSP00000358506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TC01 Q5TC02	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000418797.1	ATP1A1-008	654	106aa	ENSP00000400124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TC02	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000440951.1	ATP1A1-006	579	157aa	ENSP00000396236.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TC05	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000491156.1	ATP1A1-003	666	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479960.1	ATP1A1-005	611	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463382.1	ATP1A1-004	584	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495965.1	ATP1A1-007	417	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488733.1	ATP1A1-009	1728	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 698 bps, Translation length: 144 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000369494.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000033482 (version 1)

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Transcript: ENST00000369494.1 ATP1A1-002

Summary