Transcript: ENST00000369494.1 ATP1A1-002

Description

ATPase, Na+/K+ transporting, alpha 1 polypeptide [Source:HGNC Symbol;Acc:799]

Location

Chromosome 1: 116,925,033-116,931,285 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 12 domains and features, is associated with 2684 variant alleles and maps to 167 oligo probes.

Gene

This transcript is a product of gene ENSG00000163399.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000537345.1	ATP1A1-202	3763	1023aa	ENSP00000445306.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53351	P05023 Q5TC01 Q5TC02	NM_001160233.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000295598.5	ATP1A1-001	3654	1023aa	ENSP00000295598.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS887	P05023 Q5TC01 Q5TC02	NM_000701.7	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369496.4	ATP1A1-201	3572	992aa	ENSP00000358508.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53352	P05023 Q5TC01 Q5TC02	NM_001160234.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369494.1	ATP1A1-002	698	144aa	ENSP00000358506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TC01 Q5TC02	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000418797.1	ATP1A1-008	654	106aa	ENSP00000400124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TC02	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000440951.1	ATP1A1-006	579	157aa	ENSP00000396236.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TC05	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000491156.1	ATP1A1-003	666	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479960.1	ATP1A1-005	611	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463382.1	ATP1A1-004	584	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495965.1	ATP1A1-007	417	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488733.1	ATP1A1-009	1728	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 698 bps, Translation length: 144 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000369494.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000033482 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000369494.1 ATP1A1-002

Summary