Transcript: ENST00000490800.1 CLDN1-004

Description

claudin 1 [Source:HGNC Symbol;Acc:2032]

Gene Synonyms

CLD1, ILVASC, SEMP1

Location

About this transcript

This transcript has 2 exons, is associated with 1335 variant alleles and maps to 85 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295522.3	CLDN1-001	3481	211aa	ENSP00000295522.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3295	A5JSJ9 B4DLC3 O95832	NM_021101.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490800.1	CLDN1-004	432	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 432 bps,

Version

ENST00000490800.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000343561 (version 1)