Transcript: ENST00000294304.7 LRP5-001

Description

low density lipoprotein receptor-related protein 5 [Source:HGNC Symbol;Acc:6697]

Gene Synonyms

BMND1, EVR1, EVR4, HBM, LR3, LRP7, OPPG, OPS, OPTA1, VBCH2

Location

Chromosome 11: 68,080,077-68,216,743 forward strand.

About this transcript

This transcript has 23 exons, is annotated with 108 domains and features, is associated with 64421 variant alleles and maps to 675 oligo probes.

Gene

This transcript is a product of gene ENSG00000162337.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000294304.7	LRP5-001	5159	1615aa	ENSP00000294304.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8181	E9PHY1 O75197	NM_002335.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529702.1	LRP5-005	586	172aa	ENSP00000435315.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000529993.1	LRP5-002	5103	471aa	ENSP00000436652.1	Nonsense mediated decay		E9PHY1	-	-
ENST00000529481.1	LRP5-006	551	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000528714.1	LRP5-003	534	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000528890.1	LRP5-004	464	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533695.1	LRP5-007	267	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 5,159 bps, Translation length: 1,615 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75197

CCDS

This transcript is a member of the Human CCDS set: CCDS8181

Version

ENST00000294304.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000395088 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000294304.7 LRP5-001

Summary