Transcript: ENST00000529993.1 LRP5-002

Description

low density lipoprotein receptor-related protein 5 [Source:HGNC Symbol;Acc:6697]

Gene Synonyms

BMND1, EVR1, EVR4, HBM, LR3, LRP7, OPPG, OPS, OPTA1, VBCH2

Location

About this transcript

This transcript has 23 exons, is annotated with 31 domains and features, is associated with 41178 variant alleles and maps to 560 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000294304.7	LRP5-001	5159	1615aa	ENSP00000294304.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8181	E9PHY1 O75197	NM_002335.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529702.1	LRP5-005	586	172aa	ENSP00000435315.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000529993.1	LRP5-002	5103	471aa	ENSP00000436652.1	Nonsense mediated decay		E9PHY1	-	-
ENST00000529481.1	LRP5-006	551	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000528714.1	LRP5-003	534	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000528890.1	LRP5-004	464	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533695.1	LRP5-007	267	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 7, Transcript length: 5,103 bps, Translation length: 471 residues

Version

ENST00000529993.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000395089 (version 1)