Transcript: ENST00000502679.1 IL6R-006

Description

interleukin 6 receptor [Source:HGNC Symbol;Acc:6019]

Gene Synonyms

CD126, IL-6R-1, IL-6RA, IL6Q, IL6RA, IL6RQ, gp80

Location

Chromosome 1: 154,426,585-154,437,724 forward strand.

About this transcript

This transcript has 2 exons, is associated with 4817 variant alleles and maps to 153 oligo probes.

Gene

This transcript is a product of gene ENSG00000160712.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368485.3	IL6R-001	5914	468aa	ENSP00000357470.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1067	A0N0L5 P08887	NM_000565.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344086.4	IL6R-003	3217	365aa	ENSP00000340589.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1068	P08887	NM_181359.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000476006.1	IL6R-002	881	294aa	ENSP00000423668.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000515190.1	IL6R-007	570	190aa	ENSP00000423036.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000512471.1	IL6R-004	527	170aa	ENSP00000423184.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9R8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000507256.1	IL6R-005	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000502679.1	IL6R-006	588	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 588 bps,

Version

ENST00000502679.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000359902 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000502679.1 IL6R-006

Summary