Transcript: ENST00000481460.1 TRAPPC10-006

Description

trafficking protein particle complex 10 [Source:HGNC Symbol;Acc:11868]

Gene Synonyms

EHOC-1, EHOC1, GT334, TMEM1, TRS130, TRS30

Location

Chromosome 21: 45,499,357-45,502,781 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1764 variant alleles and maps to 117 oligo probes.

Gene

This transcript is a product of gene ENSG00000160218.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000291574.4	TRAPPC10-001	6976	1259aa	ENSP00000291574.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13704	P48553 Q76NH5	NM_003274.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380221.3	TRAPPC10-003	1763	276aa	ENSP00000369570.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86SI7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422875.1	TRAPPC10-002	5267	265aa	ENSP00000402221.1	Nonsense mediated decay		F8WE24	-	-
ENST00000483973.1	TRAPPC10-007	579	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465905.1	TRAPPC10-012	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486746.1	TRAPPC10-013	530	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000459741.1	TRAPPC10-004	5826	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468864.1	TRAPPC10-005	3909	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469521.1	TRAPPC10-008	759	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461889.1	TRAPPC10-010	563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485621.1	TRAPPC10-011	537	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481460.1	TRAPPC10-006	455	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 455 bps,

Version

ENST00000481460.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000195742 (version 1)

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Transcript: ENST00000481460.1 TRAPPC10-006

Summary