Transcript: ENST00000469521.1 TRAPPC10-008

Description

trafficking protein particle complex 10 [Source:HGNC Symbol;Acc:11868]

Gene Synonyms

EHOC-1, EHOC1, GT334, TMEM1, TRS130, TRS30

Location

Chromosome 21: 45,509,641-45,518,415 forward strand.

About this transcript

This transcript has 5 exons, is associated with 3218 variant alleles and maps to 162 oligo probes.

Gene

This transcript is a product of gene ENSG00000160218.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000291574.4	TRAPPC10-001	6976	1259aa	ENSP00000291574.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13704	P48553 Q76NH5	NM_003274.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380221.3	TRAPPC10-003	1763	276aa	ENSP00000369570.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86SI7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422875.1	TRAPPC10-002	5267	265aa	ENSP00000402221.1	Nonsense mediated decay		F8WE24	-	-
ENST00000483973.1	TRAPPC10-007	579	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465905.1	TRAPPC10-012	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486746.1	TRAPPC10-013	530	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000459741.1	TRAPPC10-004	5826	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468864.1	TRAPPC10-005	3909	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469521.1	TRAPPC10-008	759	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461889.1	TRAPPC10-010	563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485621.1	TRAPPC10-011	537	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481460.1	TRAPPC10-006	455	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 759 bps,

Version

ENST00000469521.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000195744 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000469521.1 TRAPPC10-008

Summary