Transcript: ENST00000510434.1 PEX10-005

Description

peroxisomal biogenesis factor 10 [Source:HGNC Symbol;Acc:8851]

Gene Synonyms

NALD, PBD6A, PBD6B, RNF69

Location

Chromosome 1: 2,337,957-2,343,974 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 3497 variant alleles and maps to 179 oligo probes.

Gene

This transcript is a product of gene ENSG00000157911.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000288774.3	PEX10-001	2038	346aa	ENSP00000288774.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41	J3QRM4 O60683	NM_153818.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447513.2	PEX10-002	1997	326aa	ENSP00000407922.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44045	J3QRM4 O60683	NM_002617.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507596.1	PEX10-003	1941	324aa	ENSP00000424291.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBB0 J3QRM4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508384.1	PEX10-004	611	30aa	ENSP00000464289.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QRM4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000510434.1	PEX10-005	907	209aa	ENSP00000423051.1	Nonsense mediated decay		D6RA89 J3QRM4	-	-
ENST00000502666.1	PEX10-008	653	25aa	ENSP00000461951.1	Nonsense mediated decay		J3KRE0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000514502.1	PEX10-006	548	73aa	ENSP00000425924.1	Nonsense mediated decay		D6RIF5 J3KRE0	-	-
ENST00000515760.1	PEX10-009	603	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504111.1	PEX10-007	549	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 907 bps, Translation length: 209 residues

Version

ENST00000510434.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000367457 (version 1)

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Transcript: ENST00000510434.1 PEX10-005

Summary