Transcript: ENST00000423206.1 TIAM1-005

Description

T-cell lymphoma invasion and metastasis 1 [Source:HGNC Symbol;Acc:11805]

Location

Chromosome 21: 32,490,736-32,502,539 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 5305 variant alleles and maps to 146 oligo probes.

Gene

This transcript is a product of gene ENSG00000156299.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000286827.3	TIAM1-001	7200	1591aa	ENSP00000286827.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13609	C9JMB5 Q13009	NM_003253.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541036.1	TIAM1-201	4654	1531aa	ENSP00000441570.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JMB5 F5GZ53	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455508.1	TIAM1-003	1187	225aa	ENSP00000388217.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JMB5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000423206.1	TIAM1-005	523	132aa	ENSP00000393384.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000469412.1	TIAM1-002	2313	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491927.1	TIAM1-004	938	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 523 bps, Translation length: 132 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000423206.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000192556 (version 1)

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Transcript: ENST00000423206.1 TIAM1-005

Summary