Transcript: ENST00000315997.5 C16orf89-001

Description

chromosome 16 open reading frame 89 [Source:HGNC Symbol;Acc:28687]

Gene Synonyms

MGC45438

Location

Chromosome 16: 5,094,123-5,116,111 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 7 domains and features, is associated with 13206 variant alleles and maps to 347 oligo probes.

Gene

This transcript is a product of gene ENSG00000153446.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000315997.5	C16orf89-001	1872	402aa	ENSP00000324672.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42116	Q6UX73	NM_152459.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000350219.4	C16orf89-201	1871	440aa	ENSP00000283478.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6UX73	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000474471.3	C16orf89-002	1829	434aa	ENSP00000417158.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422873.1	C16orf89-202	1513	399aa	ENSP00000390402.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V0F0	NM_001098514.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472572.3	C16orf89-003	1444	361aa	ENSP00000420566.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45404	Q6UX73	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591875.1	C16orf89-004	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586629.1	C16orf89-006	576	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592343.1	C16orf89-005	456	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,872 bps, Translation length: 402 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6UX73

CCDS

This transcript is a member of the Human CCDS set: CCDS42116

Version

ENST00000315997.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000354524 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000315997.5 C16orf89-001

Summary