Transcript: ENST00000513575.1 CENPH-004

Description

centromere protein H [Source:HGNC Symbol;Acc:17268]

Gene Synonyms

ICEN35

Location

Chromosome 5: 68,485,419-68,498,396 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 4 domains and features, is associated with 6098 variant alleles and maps to 147 oligo probes.

Gene

This transcript is a product of gene ENSG00000153044.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000283006.2	CENPH-001	1389	247aa	ENSP00000283006.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3998	Q9H3R5	NM_022909.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515001.1	CENPH-002	1305	228aa	ENSP00000426014.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KVZ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502689.1	CENPH-003	692	187aa	ENSP00000423936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000513575.1	CENPH-004	437	98aa	ENSP00000422665.1	Nonsense mediated decay		D6RBJ6	-	-
ENST00000514753.1	CENPH-005	750	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000510742.1	CENPH-006	724	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 437 bps, Translation length: 98 residues

Version

ENST00000513575.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000368817 (version 1)

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Transcript: ENST00000513575.1 CENPH-004

Summary