Transcript: ENST00000282391.5 PAN3-201

Description

PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:29991]

Location

Chromosome 13: 28,813,770-28,869,475 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 6 domains and features, is associated with 24274 variant alleles and maps to 496 oligo probes.

Gene

This transcript is a product of gene ENSG00000152520.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380958.3	PAN3-002	2833	887aa	ENSP00000370345.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9329	Q58A45 Q6ZMN5	NM_175854.7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399613.1	PAN3-001	4940	687aa	ENSP00000382522.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q58A45 Q6ZMN5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000282391.5	PAN3-201	4544	575aa	ENSP00000282391.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q58A45 Q6ZMN5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483842.1	PAN3-003	729	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503791.1	PAN3-004	2443	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 4,544 bps, Translation length: 575 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q58A45

Version

ENST00000282391.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000282391.5 PAN3-201

Summary