Transcript: ENST00000440599.2 KCNJ1-003

Description

potassium inwardly-rectifying channel, subfamily J, member 1 [Source:HGNC Symbol;Acc:6255]

Gene Synonyms

KIR1.1, Kir1.1, ROMK, ROMK1

Location

Chromosome 11: 128,707,952-128,737,265 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 24 domains and features, is associated with 12917 variant alleles and maps to 438 oligo probes.

Gene

This transcript is a product of gene ENSG00000151704.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392664.2	KCNJ1-004	1674	391aa	ENSP00000376432.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8476	P48048	NM_000220.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392665.2	KCNJ1-005	4074	372aa	ENSP00000376433.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8477	P48048	NM_153764.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392666.1	KCNJ1-201	2616	372aa	ENSP00000376434.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8477	P48048	NM_153766.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000324036.3	KCNJ1-001	2614	372aa	ENSP00000316233.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8477	P48048	NM_153767.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440599.2	KCNJ1-003	2539	372aa	ENSP00000406320.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8477	P48048	NM_153765.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000324003.3	KCNJ1-002	718	139aa	ENSP00000316136.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P48048	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000531562.1	KCNJ1-006	525	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 2,539 bps, Translation length: 372 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P48048

CCDS

This transcript is a member of the Human CCDS set: CCDS8477

Version

ENST00000440599.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000386232 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000440599.2 KCNJ1-003

Summary