Description
high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:5009]
Gene Synonyms
BABL, HMGI-C, HMGIC, LIPO, STQTL9
Location
Chromosome 12: 66,218,678-66,352,634 forward strand.
About this transcript
This transcript has 4 exons, is annotated with 19 domains and features, is associated with 54881 variant alleles and maps to 528 oligo probes.
Gene
This transcript is a product of gene ENSG00000149948.9 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000403681.2 | HMGA2-001 | 4473 | 109aa | ENSP00000384026.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44936 | B2KX87 P52926 Q8IZX8 | NM_003483.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000541363.1 | HMGA2-011 | 8094 | 99aa | ENSP00000439317.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H2U8 Q8IZX8 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000536545.1 | HMGA2-003 | 1788 | 147aa | ENSP00000437621.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H6H0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000354636.3 | HMGA2-008 | 1529 | 106aa | ENSP00000346658.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31854 | P52926 | NM_003484.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000425208.2 | HMGA2-006 | 1444 | 92aa | ENSP00000407306.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YFY4 P52926 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000393578.3 | HMGA2-005 | 1398 | 90aa | ENSP00000377206.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P52926 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000393577.3 | HMGA2-013 | 611 | 118aa | ENSP00000377205.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H2A4 Q8IZX8 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000537429.1 | HMGA2-007 | 1527 | 86aa | ENSP00000443372.1 | Nonsense mediated decay | P52926 | - | - | |
| ENST00000537275.1 | HMGA2-004 | 1508 | 103aa | ENSP00000437747.1 | Nonsense mediated decay | P52926 | - | - | |
| ENST00000539662.1 | HMGA2-012 | 485 | 55aa | ENSP00000440919.1 | Nonsense mediated decay | H0YFY4 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000545998.1 | HMGA2-009 | 1584 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |