Transcript: ENST00000477298.1 C7orf26-004

Description

chromosome 7 open reading frame 26 [Source:HGNC Symbol;Acc:21702]

Gene Synonyms

MGC2718

Location

Chromosome 7: 6,639,605-6,641,890 forward strand.

About this transcript

This transcript has 2 exons, is associated with 1380 variant alleles and maps to 146 oligo probes.

Gene

This transcript is a product of gene ENSG00000146576.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000344417.5	C7orf26-001	2182	449aa	ENSP00000340220.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5353	Q96N11	NM_024067.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359073.5	C7orf26-002	1762	352aa	ENSP00000351974.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96N11	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445375.1	C7orf26-007	675	149aa	ENSP00000390166.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000440409.1	C7orf26-005	458	97aa	ENSP00000396194.1	Nonsense mediated decay		H7C0Q5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000472693.1	C7orf26-003	1006	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477298.1	C7orf26-004	542	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 542 bps,

Version

ENST00000477298.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000324154 (version 1)

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Transcript: ENST00000477298.1 C7orf26-004

Summary