Transcript: ENST00000397100.2 C7orf50-201

Description

chromosome 7 open reading frame 50 [Source:HGNC Symbol;Acc:22421]

Gene Synonyms

MGC11257, YCR016W

Location

Chromosome 7: 1,036,623-1,177,893 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 87325 variant alleles and maps to 277 oligo probes.

Gene

This transcript is a product of gene ENSG00000146540.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397098.3	C7orf50-002	2131	194aa	ENSP00000380286.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5320	C9JQV0 Q9BRJ6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357429.6	C7orf50-001	1294	194aa	ENSP00000350011.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5320	C9JQV0 Q9BRJ6	NM_032350.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397100.2	C7orf50-201	1264	194aa	ENSP00000380288.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5320	C9JQV0 Q9BRJ6	NM_001134396.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412051.1	C7orf50-003	1147	179aa	ENSP00000407380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000491163.1	C7orf50-007	621	192aa	ENSP00000420130.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JQV0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000444428.1	C7orf50-005	507	162aa	ENSP00000396542.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C0T1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000488073.1	C7orf50-006	853	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465681.1	C7orf50-004	2621	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,264 bps, Translation length: 194 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BRJ6

CCDS

This transcript is a member of the Human CCDS set: CCDS5320

Version

ENST00000397100.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript having same CDS:	OTTHUMT00000322817 (version 3) OTTHUMT00000322816 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000397100.2 C7orf50-201

Summary