Transcript: ENST00000388882.5 TNFAIP8-008

Description

tumor necrosis factor, alpha-induced protein 8 [Source:HGNC Symbol;Acc:17260]

Gene Synonyms

GG2-1, MDC-3.13, NDED, SCC-S2, SCCS2

Location

Chromosome 5: 118,604,449-118,728,779 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 4 domains and features, is associated with 58466 variant alleles and maps to 193 oligo probes.

Gene

This transcript is a product of gene ENSG00000145779.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000504771.2	TNFAIP8-001	8681	198aa	ENSP00000422245.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47258	E5RIJ3 O95379	NM_014350.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503646.1	TNFAIP8-002	2502	198aa	ENSP00000421848.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47258	E5RIJ3 O95379	NM_001286813.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415806.2	TNFAIP8-003	1990	39aa	ENSP00000408534.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KQT8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513374.1	TNFAIP8-007	1385	210aa	ENSP00000427424.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS68933	B7Z713 E5RIJ3	NM_001286814.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000274456.6	TNFAIP8-006	795	188aa	ENSP00000274456.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47257	E5RIJ3 O95379	NM_001077654.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504642.1	TNFAIP8-004	711	200aa	ENSP00000427160.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RCM8 E5RIJ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000388882.5	TNFAIP8-008	541	68aa	ENSP00000429432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIJ3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 541 bps, Translation length: 68 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000388882.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000381409 (version 1)

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Transcript: ENST00000388882.5 TNFAIP8-008

Summary