Transcript: ENST00000492076.1 SLC20A1-007

Description

solute carrier family 20 (phosphate transporter), member 1 [Source:HGNC Symbol;Acc:10946]

Gene Synonyms

GLVR1, Glvr-1, PIT1, PiT-1

Location

Chromosome 2: 113,409,847-113,410,549 forward strand.

About this transcript

This transcript has 2 exons, is associated with 304 variant alleles and maps to 129 oligo probes.

Gene

This transcript is a product of gene ENSG00000144136.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000272542.3	SLC20A1-001	3381	679aa	ENSP00000272542.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2099	A7LNJ1 Q8WUM9	NM_005415.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423633.1	SLC20A1-005	668	89aa	ENSP00000392050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000433924.1	SLC20A1-008	638	213aa	ENSP00000390021.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000413135.1	SLC20A1-009	584	115aa	ENSP00000413393.1	Nonsense mediated decay		H7C3Q9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000456264.1	SLC20A1-006	574	98aa	ENSP00000403763.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000480984.1	SLC20A1-010	738	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490674.1	SLC20A1-003	3202	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000498224.1	SLC20A1-004	692	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492076.1	SLC20A1-007	613	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 613 bps,

Version

ENST00000492076.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000330612 (version 1)

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Transcript: ENST00000492076.1 SLC20A1-007

Summary