Transcript: ENST00000416743.1 CGN-008

Description

cingulin [Source:HGNC Symbol;Acc:17429]

Gene Synonyms

KIAA1319

Location

Chromosome 1: 151,491,846-151,496,037 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 1715 variant alleles and maps to 105 oligo probes.

Gene

This transcript is a product of gene ENSG00000143375.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000271636.7	CGN-001	5091	1203aa	ENSP00000271636.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS999	A2A3M4 A6PVU7 Q9P2M7	NM_020770.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427934.2	CGN-007	1138	291aa	ENSP00000410836.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A3M4 A6PVU7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000502442.1	CGN-006	589	170aa	ENSP00000422299.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A3M4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000505188.1	CGN-005	564	170aa	ENSP00000425532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A3M4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000416743.1	CGN-008	394	131aa	ENSP00000390686.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000473377.1	CGN-002	2956	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467998.1	CGN-004	930	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464886.1	CGN-003	373	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 394 bps, Translation length: 131 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000416743.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000330644 (version 3)

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Recent locations

Transcript: ENST00000416743.1 CGN-008

Summary