Transcript: ENST00000502442.1 CGN-006

Description

cingulin [Source:HGNC Symbol;Acc:17429]

Gene Synonyms

KIAA1319

Location

Chromosome 1: 151,483,412-151,491,505 forward strand.

About this transcript

This transcript has 2 exons, is associated with 3357 variant alleles and maps to 48 oligo probes.

Gene

This transcript is a product of gene ENSG00000143375.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000271636.7	CGN-001	5091	1203aa	ENSP00000271636.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS999	A2A3M4 A6PVU7 Q9P2M7	NM_020770.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427934.2	CGN-007	1138	291aa	ENSP00000410836.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A3M4 A6PVU7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000502442.1	CGN-006	589	170aa	ENSP00000422299.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A3M4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000505188.1	CGN-005	564	170aa	ENSP00000425532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A3M4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000416743.1	CGN-008	394	131aa	ENSP00000390686.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000473377.1	CGN-002	2956	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467998.1	CGN-004	930	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464886.1	CGN-003	373	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 589 bps, Translation length: 170 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000502442.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000258042 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000502442.1 CGN-006

Summary