Transcript: ENST00000464817.1 XPR1-004

Description

xenotropic and polytropic retrovirus receptor 1 [Source:HGNC Symbol;Acc:12827]

Gene Synonyms

SYG1, X3, XR

Location

About this transcript

This transcript has 3 exons, is associated with 5420 variant alleles and maps to 110 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367590.4	XPR1-001	8474	696aa	ENSP00000356562.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1340	Q9UBH6	NM_004736.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367589.3	XPR1-002	4126	631aa	ENSP00000356561.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44284	Q9UBH6	NM_001135669.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467345.1	XPR1-005	736	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464817.1	XPR1-004	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498177.1	XPR1-003	485	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 567 bps,

Version

ENST00000464817.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000085005 (version 1)