Transcript: ENST00000568393.1 ADAMTS18-010

Description

ADAM metallopeptidase with thrombospondin type 1 motif, 18 [Source:HGNC Symbol;Acc:17110]

Gene Synonyms

ADAMTS21, KNO2, MMCAT

Location

Chromosome 16: 77,333,936-77,355,033 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 12398 variant alleles and maps to 58 oligo probes.

Gene

This transcript is a product of gene ENSG00000140873.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000282849.5	ADAMTS18-001	5913	1221aa	ENSP00000282849.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10926	Q8TE60	NM_199355.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562345.1	ADAMTS18-009	556	185aa	ENSP00000457395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000562332.1	ADAMTS18-011	349	62aa	ENSP00000454368.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000449265.2	ADAMTS18-002	1632	274aa	ENSP00000392540.2	Nonsense mediated decay		B4DEX3	-	-
ENST00000567121.1	ADAMTS18-006	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000564369.1	ADAMTS18-005	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000568393.1	ADAMTS18-010	669	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000569309.1	ADAMTS18-007	660	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567914.1	ADAMTS18-008	626	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 669 bps,

Version

ENST00000568393.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000433911 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000568393.1 ADAMTS18-010

Summary