Transcript: ENST00000449265.2 ADAMTS18-002

Description

ADAM metallopeptidase with thrombospondin type 1 motif, 18 [Source:HGNC Symbol;Acc:17110]

Gene Synonyms

ADAMTS21, KNO2, MMCAT

Location

Chromosome 16: 77,389,848-77,468,931 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 6 domains and features, is associated with 48453 variant alleles and maps to 192 oligo probes.

Gene

This transcript is a product of gene ENSG00000140873.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000282849.5	ADAMTS18-001	5913	1221aa	ENSP00000282849.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10926	Q8TE60	NM_199355.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562345.1	ADAMTS18-009	556	185aa	ENSP00000457395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000562332.1	ADAMTS18-011	349	62aa	ENSP00000454368.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000449265.2	ADAMTS18-002	1632	274aa	ENSP00000392540.2	Nonsense mediated decay		B4DEX3	-	-
ENST00000567121.1	ADAMTS18-006	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000564369.1	ADAMTS18-005	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000568393.1	ADAMTS18-010	669	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000569309.1	ADAMTS18-007	660	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567914.1	ADAMTS18-008	626	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 5, Transcript length: 1,632 bps, Translation length: 274 residues

Version

ENST00000449265.2

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000433912 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000449265.2 ADAMTS18-002

Summary