Transcript: ENST00000563625.1 ZFHX3-003

Description

zinc finger homeobox 3 [Source:HGNC Symbol;Acc:777]

Gene Synonyms

ATBF1, ATBT, ZNF927

Location

About this transcript

This transcript has 2 exons, is associated with 29221 variant alleles and maps to 74 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000268489.5	ZFHX3-001	16064	3703aa	ENSP00000268489.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10908	Q15911 Q6TCJ2	NM_006885.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397992.5	ZFHX3-002	13841	2789aa	ENSP00000438926.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54035	Q15911	NM_001164766.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558842.1	ZFHX3-004	240	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000563625.1	ZFHX3-003	455	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 455 bps,

Version

ENST00000563625.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000421938 (version 1)