Description
nucleoporin 54kDa [Source:HGNC Symbol;Acc:17359]
Location
Chromosome 4: 77,065,350-77,069,550 reverse strand.
About this transcript
This transcript has 5 exons, is annotated with 1 domain and feature, is associated with 1939 variant alleles and maps to 107 oligo probes.
Gene
This transcript is a product of gene ENSG00000138750.10 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000264883.3 | NUP54-001 | 2367 | 507aa | ENSP00000264883.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3576 | E7EUM5 Q53H29 Q7Z3B4 | NM_017426.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000342467.6 | NUP54-201 | 2142 | 291aa | ENSP00000344052.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7Z3B4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000514987.1 | NUP54-004 | 1563 | 459aa | ENSP00000421304.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS63998 | B4DT35 E7EUM5 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000458189.2 | NUP54-202 | 1385 | 327aa | ENSP00000406103.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EUM5 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000514901.1 | NUP54-009 | 500 | 158aa | ENSP00000421932.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAH0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000507257.1 | NUP54-002 | 1938 | 102aa | ENSP00000425243.1 | Nonsense mediated decay | D6RBF7 | - | - | |
| ENST00000502850.1 | NUP54-003 | 1604 | 138aa | ENSP00000426609.1 | Nonsense mediated decay | D6RFI8 | - | - | |
| ENST00000512151.1 | NUP54-005 | 1385 | 102aa | ENSP00000424172.1 | Nonsense mediated decay | D6RBF7 | - | - | |
| ENST00000513352.1 | NUP54-010 | 579 | 84aa | ENSP00000424389.1 | Nonsense mediated decay | D6RB65 | - | - | |
| ENST00000515460.1 | NUP54-008 | 849 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000508465.1 | NUP54-017 | 744 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000514307.1 | NUP54-011 | 566 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000506098.1 | NUP54-013 | 548 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000508583.1 | NUP54-007 | 521 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000510569.1 | NUP54-014 | 494 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000510884.1 | NUP54-012 | 441 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000508604.1 | NUP54-006 | 1671 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000514313.1 | NUP54-015 | 537 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000513248.1 | NUP54-018 | 531 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000504173.1 | NUP54-016 | 314 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |