Transcript: ENST00000462386.1 IDH1-003

Description

isocitrate dehydrogenase 1 (NADP+), soluble [Source:HGNC Symbol;Acc:5382]

Gene Synonyms

HEL-S-26, IDCD, IDH, IDP, IDPC, PICD

Location

Chromosome 2: 209,112,106-209,119,785 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 4149 variant alleles and maps to 158 oligo probes.

Gene

This transcript is a product of gene ENSG00000138413.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000415913.1	IDH1-006	2441	414aa	ENSP00000390265.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2381	B4DXS4 C9J4N6 C9JJE5 C9JLU6 O75874 Q0QER2 Q6FHQ6	NM_001282387.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000345146.2	IDH1-001	2382	414aa	ENSP00000260985.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2381	B4DXS4 C9J4N6 C9JJE5 C9JLU6 O75874 Q0QER2 Q6FHQ6	NM_005896.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446179.1	IDH1-004	2298	414aa	ENSP00000410513.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2381	B4DXS4 C9J4N6 C9JJE5 C9JLU6 O75874 Q0QER2 Q6FHQ6	NM_001282386.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415282.1	IDH1-009	942	157aa	ENSP00000391075.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4N6 C9JJE5 C9JLU6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000417583.1	IDH1-008	702	73aa	ENSP00000409045.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JJE5 C9JLU6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000451391.1	IDH1-007	563	62aa	ENSP00000396787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JJE5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000462386.1	IDH1-003	1614	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484575.1	IDH1-012	1044	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481557.1	IDH1-010	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,614 bps,

Version

ENST00000462386.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000336669 (version 1)

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Transcript: ENST00000462386.1 IDH1-003

Summary