Transcript: ENST00000448623.1 GTF2B-003

Description

general transcription factor IIB [Source:HGNC Symbol;Acc:4648]

Gene Synonyms

TF2B, TFIIB

Location

Chromosome 1: 89,318,907-89,357,179 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 15 domains and features, is associated with 17605 variant alleles and maps to 304 oligo probes.

Gene

This transcript is a product of gene ENSG00000137947.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370500.5	GTF2B-001	1351	316aa	ENSP00000359531.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS715	Q00403	NM_001514.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418217.1	GTF2B-002	783	231aa	ENSP00000402345.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1APE2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000448623.1	GTF2B-003	770	224aa	ENSP00000415741.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1APE1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000494819.1	GTF2B-005	893	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471296.1	GTF2B-006	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486078.1	GTF2B-004	528	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471471.1	GTF2B-007	516	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 770 bps, Translation length: 224 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000448623.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000029281 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000448623.1 GTF2B-003

Summary