Transcript: ENST00000373302.3 STXBP1-001

Description

syntaxin binding protein 1 [Source:HGNC Symbol;Acc:11444]

Gene Synonyms

MUNC18-1, NSEC1, P67, RBSEC1, STXBP1, UNC18, UNC18A, hUNC18, rbSec1

Location

Chromosome 9: 130,374,544-130,454,995 forward strand.

About this transcript

This transcript has 20 exons, is annotated with 13 domains and features, is associated with 32785 variant alleles and maps to 746 oligo probes.

Gene

This transcript is a product of gene ENSG00000136854.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373302.3	STXBP1-001	3909	603aa	ENSP00000362399.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6874	P61764	NM_003165.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373299.1	STXBP1-002	3759	594aa	ENSP00000362396.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35146	P61764 Q59GC9 Q68CM6	NM_001032221.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000481942.1	STXBP1-004	617	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496504.1	STXBP1-003	560	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494254.1	STXBP1-005	549	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476182.1	STXBP1-006	241	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495829.1	STXBP1-007	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 3,909 bps, Translation length: 603 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P61764

CCDS

This transcript is a member of the Human CCDS set: CCDS6874

Version

ENST00000373302.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000054228 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000373302.3 STXBP1-001

Summary