Transcript: ENST00000445846.1 STAM-002

Description

signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 [Source:HGNC Symbol;Acc:11357]

Gene Synonyms

STAM-1, STAM1

Location

Chromosome 10: 17,686,207-17,735,280 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 22778 variant alleles and maps to 232 oligo probes.

Gene

This transcript is a product of gene ENSG00000136738.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377524.3	STAM-001	2972	540aa	ENSP00000366746.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7122	A6NMU3 B4DZT2 C9J1E5 Q92783	NM_003473.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540523.1	STAM-201	1984	429aa	ENSP00000438073.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NMU3 B4DZT2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377500.1	STAM-003	729	173aa	ENSP00000366721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NMU3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000445846.1	STAM-002	740	42aa	ENSP00000400025.1	Nonsense mediated decay		C9J1E5	-	-
ENST00000494250.1	STAM-005	462	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486183.1	STAM-004	274	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 740 bps, Translation length: 42 residues

Version

ENST00000445846.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000047040 (version 2)

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Transcript: ENST00000445846.1 STAM-002

Summary