Transcript: ENST00000377524.3 STAM-001

Description

signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 [Source:HGNC Symbol;Acc:11357]

Gene Synonyms

STAM-1, STAM1

Location

About this transcript

This transcript has 14 exons, is annotated with 27 domains and features, is associated with 33655 variant alleles and maps to 790 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377524.3	STAM-001	2972	540aa	ENSP00000366746.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7122	A6NMU3 B4DZT2 C9J1E5 Q92783	NM_003473.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540523.1	STAM-201	1984	429aa	ENSP00000438073.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NMU3 B4DZT2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377500.1	STAM-003	729	173aa	ENSP00000366721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NMU3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000445846.1	STAM-002	740	42aa	ENSP00000400025.1	Nonsense mediated decay		C9J1E5	-	-
ENST00000494250.1	STAM-005	462	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486183.1	STAM-004	274	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,972 bps, Translation length: 540 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92783

CCDS

This transcript is a member of the Human CCDS set: CCDS7122

Version

ENST00000377524.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000047039 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.