Transcript: ENST00000444384.3 SFTPD-002

Description

surfactant protein D [Source:HGNC Symbol;Acc:10803]

Gene Synonyms

COLEC7, PSP-D, PSPD, SFTP4, SP-D

Location

About this transcript

This transcript has 6 exons, is annotated with 11 domains and features, is associated with 17114 variant alleles and maps to 184 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372292.3	SFTPD-001	1281	375aa	ENSP00000361366.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7362	P35247	NM_003019.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444384.3	SFTPD-002	659	218aa	ENSP00000394325.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T0M2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 659 bps, Translation length: 218 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000444384.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000049012 (version 4)