Transcript: ENST00000372292.3 SFTPD-001

Description

surfactant protein D [Source:HGNC Symbol;Acc:10803]

Gene Synonyms

COLEC7, PSP-D, PSPD, SFTP4, SP-D

Location

About this transcript

This transcript has 8 exons, is annotated with 19 domains and features, is associated with 4949 variant alleles and maps to 349 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372292.3	SFTPD-001	1281	375aa	ENSP00000361366.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7362	P35247	NM_003019.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444384.3	SFTPD-002	659	218aa	ENSP00000394325.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T0M2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,281 bps, Translation length: 375 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P35247

CCDS

This transcript is a member of the Human CCDS set: CCDS7362

Version

ENST00000372292.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000049011 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.