Transcript: ENST00000493023.1 C1QTNF6-005

Description

C1q and tumor necrosis factor related protein 6 [Source:HGNC Symbol;Acc:14343]

Gene Synonyms

CTFP6, CTRP6, ZACRP6

Location

Chromosome 22: 37,576,211-37,581,988 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 2829 variant alleles and maps to 366 oligo probes.

Gene

This transcript is a product of gene ENSG00000133466.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000337843.2	C1QTNF6-004	2934	278aa	ENSP00000338812.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13943	Q9BXI9	NM_031910.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397110.2	C1QTNF6-001	1647	278aa	ENSP00000380299.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13943	Q9BXI9	NM_182486.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000255836.6	C1QTNF6-201	563	154aa	ENSP00000255836.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BXI9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434784.1	C1QTNF6-003	975	116aa	ENSP00000399243.1	Nonsense mediated decay		F8WC87	-	-
ENST00000470655.1	C1QTNF6-002	5003	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497071.1	C1QTNF6-006	688	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467564.1	C1QTNF6-007	479	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493023.1	C1QTNF6-005	3296	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 3,296 bps,

Version

ENST00000493023.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000318808 (version 1)

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Transcript: ENST00000493023.1 C1QTNF6-005

Summary