Transcript: ENST00000599698.1 PRAM1-003

Description

PML-RARA regulated adaptor molecule 1 [Source:HGNC Symbol;Acc:30091]

Gene Synonyms

PML-RAR, PRAM-1

Location

Chromosome 19: 8,554,940-8,555,759 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 622 variant alleles and maps to 193 oligo probes.

Gene

This transcript is a product of gene ENSG00000133246.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000423345.4	PRAM1-001	2667	670aa	ENSP00000408342.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45954	Q96QH2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000255612.3	PRAM1-201	2162	669aa	ENSP00000255612.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K4DI84	NM_032152.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000600262.1	PRAM1-004	583	180aa	ENSP00000471634.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R149	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000594696.1	PRAM1-002	1407	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000599698.1	PRAM1-003	633	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 633 bps,

Version

ENST00000599698.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000460326 (version 1)

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Transcript: ENST00000599698.1 PRAM1-003

Summary