Transcript: ENST00000466935.1 SDF2L1-002

Description

stromal cell-derived factor 2-like 1 [Source:HGNC Symbol;Acc:10676]

Gene Synonyms

AP000553.C22.4, OTTHUMT00000075032

Location

About this transcript

This transcript has 2 exons, is associated with 539 variant alleles and maps to 201 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000248958.4	SDF2L1-001	865	221aa	ENSP00000248958.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13792	Q9HCN8	NM_022044.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466935.1	SDF2L1-002	601	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 601 bps,

Version

ENST00000466935.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000320198 (version 1)