Description
CCR4-NOT transcription complex, subunit 1 [Source:HGNC Symbol;Acc:7877]
Gene Synonyms
AD-005, CDC39, KIAA1007, NOT1, NOT1H
Location
Chromosome 16: 58,633,165-58,658,690 reverse strand.
About this transcript
This transcript has 2 exons, is associated with 12684 variant alleles and maps to 26 oligo probes.
Gene
This transcript is a product of gene ENSG00000125107.12 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000317147.5 | CNOT1-001 | 8471 | 2376aa | ENSP00000320949.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10799 | A5YKK6 B3KS60 B7Z6X2 H3BPF1 H3BT18 H3BUY8 | NM_016284.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000569240.1 | CNOT1-003 | 7660 | 2371aa | ENSP00000455635.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58468 | A5YKK6 B3KS60 B7Z6X2 H3BPF1 H3BT18 H3BUY8 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000441024.2 | CNOT1-002 | 4999 | 1551aa | ENSP00000413113.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45501 | A5YKK6 H3BPF1 H3BT18 H3BUY8 | NM_206999.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000245138.4 | CNOT1-201 | 4098 | 1227aa | ENSP00000245138.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KS60 B5MDN3 B7Z6X2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000568917.1 | CNOT1-019 | 1317 | 439aa | ENSP00000454611.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BMZ2 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000569882.1 | CNOT1-023 | 831 | 277aa | ENSP00000454377.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BMH0 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000567285.1 | CNOT1-016 | 722 | 241aa | ENSP00000458057.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000564557.1 | CNOT1-010 | 582 | 62aa | ENSP00000456975.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BPF1 H3BT18 H3BUY8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000562046.1 | CNOT1-022 | 578 | 193aa | ENSP00000456131.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000567133.1 | CNOT1-017 | 553 | 185aa | ENSP00000454763.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000569020.1 | CNOT1-008 | 535 | 25aa | ENSP00000457869.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BUY8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000565697.1 | CNOT1-007 | 385 | 25aa | ENSP00000455289.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BPF1 H3BUY8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000567188.1 | CNOT1-005 | 7830 | 2150aa | ENSP00000456649.1 | Nonsense mediated decay | A5YKK6 H3BPF1 H3BT18 H3BUY8 | - | - | |
| ENST00000565605.1 | CNOT1-020 | 739 | 96aa | ENSP00000457460.1 | Nonsense mediated decay | H3BPF1 H3BT18 H3BU44 H3BUY8 | - | - | |
| ENST00000566240.1 | CNOT1-018 | 567 | 68aa | ENSP00000457173.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000569732.1 | CNOT1-015 | 906 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000568158.1 | CNOT1-009 | 496 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000569263.1 | CNOT1-006 | 304 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000563130.1 | CNOT1-004 | 2280 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000569916.1 | CNOT1-011 | 599 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000563283.1 | CNOT1-012 | 551 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000569924.1 | CNOT1-014 | 493 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000570139.1 | CNOT1-013 | 458 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |