Transcript: ENST00000467008.1 ATXN1-004

Description

ataxin 1 [Source:HGNC Symbol;Acc:10548]

Gene Synonyms

ATX1, D6S504E, SCA1

Location

Chromosome 6: 16,737,082-16,761,707 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 10652 variant alleles and maps to 179 oligo probes.

Gene

This transcript is a product of gene ENSG00000124788.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000244769.4	ATXN1-001	10602	815aa	ENSP00000244769.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34342	P54253	NM_000332.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000436367.1	ATXN1-201	10587	815aa	ENSP00000416360.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34342	P54253	NM_001128164.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467008.1	ATXN1-004	3362	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498374.1	ATXN1-005	1648	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473388.2	ATXN1-008	1569	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483591.2	ATXN1-002	892	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495178.1	ATXN1-007	853	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483954.1	ATXN1-009	744	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492857.1	ATXN1-003	647	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479680.1	ATXN1-006	568	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 3,362 bps,

Version

ENST00000467008.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000329717 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000467008.1 ATXN1-004

Summary