Transcript: ENST00000354325.2 TRERF1-003

Description

transcriptional regulating factor 1 [Source:HGNC Symbol;Acc:18273]

Gene Synonyms

BCAR2, HSA277276, RAPA, RP1-139D8.5, TREP132, TReP-132, dJ139D8.5

Location

Chromosome 6: 42,195,887-42,418,999 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 38 domains and features, is associated with 92324 variant alleles and maps to 560 oligo probes.

Gene

This transcript is a product of gene ENSG00000124496.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372922.4	TRERF1-001	7286	1200aa	ENSP00000362013.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4867	Q96PN7	NM_033502.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541110.1	TRERF1-202	7646	1220aa	ENSP00000439689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q05GC8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372917.4	TRERF1-201	7373	1129aa	ENSP00000362008.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96PN7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340840.2	TRERF1-002	4174	1129aa	ENSP00000339438.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96PN7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354325.2	TRERF1-003	4138	1117aa	ENSP00000346285.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96PN7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 16, Coding exons: 13, Transcript length: 4,138 bps, Translation length: 1,117 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96PN7

Version

ENST00000354325.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000040553 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000354325.2 TRERF1-003

Summary