Transcript: ENST00000489714.1 TTC21B-005

Description

tetratricopeptide repeat domain 21B [Source:HGNC Symbol;Acc:25660]

Gene Synonyms

ATD4, FLJ11457, IFT139, JBTS11, KIAA1992, NPHP12, THM1

Location

Chromosome 2: 166,713,985-166,727,501 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 5879 variant alleles and maps to 182 oligo probes.

Gene

This transcript is a product of gene ENSG00000123607.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000243344.7	TTC21B-001	5482	1316aa	ENSP00000243344.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33315	B3KU32 Q7Z4L5	NM_024753.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536175.1	TTC21B-201	1589	254aa	ENSP00000438692.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z4L5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392695.2	TTC21B-003	1572	283aa	ENSP00000376460.2	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000489714.1	TTC21B-005	647	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497425.1	TTC21B-009	617	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464374.1	TTC21B-006	1844	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486672.1	TTC21B-004	745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476227.1	TTC21B-007	651	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484129.1	TTC21B-008	484	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 647 bps,

Version

ENST00000489714.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000333774 (version 1)

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Transcript: ENST00000489714.1 TTC21B-005

Summary