Transcript: ENST00000547487.1 MMP19-010

Description

matrix metallopeptidase 19 [Source:HGNC Symbol;Acc:7165]

Gene Synonyms

MMP18, RASI, RASI-1

Location

Chromosome 12: 56,234,911-56,236,724 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 900 variant alleles and maps to 156 oligo probes.

Gene

This transcript is a product of gene ENSG00000123342.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000322569.4	MMP19-001	2229	508aa	ENSP00000313437.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8895	Q99542	NM_002429.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394182.1	MMP19-201	2245	222aa	ENSP00000377736.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q99542	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548629.1	MMP19-011	1813	485aa	ENSP00000446979.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W1C3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409200.3	MMP19-005	1431	305aa	ENSP00000386625.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61146	B4E030	NM_001272101.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548882.1	MMP19-003	3840	81aa	ENSP00000447363.1	Nonsense mediated decay		A6ND33	-	-
ENST00000552872.1	MMP19-006	2350	63aa	ENSP00000446776.1	Nonsense mediated decay		Q99542	-	-
ENST00000552763.1	MMP19-004	946	108aa	ENSP00000449752.1	Nonsense mediated decay		B4DNP3	-	-
ENST00000547487.1	MMP19-010	568	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000547299.1	MMP19-009	174	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000547685.1	MMP19-007	2016	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 568 bps,

Version

ENST00000547487.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000408028 (version 1)

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Transcript: ENST00000547487.1 MMP19-010

Summary